Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6121

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6121: 14489 - KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family, at 49,647 to 51,616 14489

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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48,756 + -3.1
48,786 + -0.5
48,798 - +1.2
48,886 - +0.0
49,195 - +1.0
49,790 - +0.2
50,754 - 14489 mRNA_6121 0.56 -1.4
50,914 - 14489 mRNA_6121 0.64 -2.0
51,137 + 14489 mRNA_6121 0.76 -1.0
51,775 + -2.6
51,967 - +2.4
52,603 + -1.1

Or see this region's nucleotide sequence