Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6266

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14634 and 14635 are separated by 219 nucleotides mRNA_6266: 14634 - Hypothetical Protein, at 396,556 to 399,256 14634 mRNA_6267: 14635 - KOG1721 FOG Zn-finger, at 399,476 to 403,885 14635

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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398,544 + 14634 mRNA_6266 0.74 +2.0
399,156 - -1.0
399,162 - -2.0
399,165 - -0.4
399,179 - -1.0
399,185 + -1.0
399,188 - -4.5
399,300 - -2.1
399,305 - -1.4
399,305 - -1.4
399,306 - +0.2
399,315 + -0.8
399,316 - -0.0
399,316 - -2.4
399,318 - -0.2
399,324 - -1.6
399,325 + -0.5
399,338 + +0.1
399,344 - -2.3
399,349 - -1.0
399,489 + -1.5
399,523 + -0.9
399,654 + -1.4
399,796 - -3.1
399,915 - -2.4

Or see this region's nucleotide sequence