Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6353

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14721 and 14722 are separated by 234 nucleotides mRNA_6353: 14721 - KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins, at 616,039 to 616,629 14721 mRNA_6354: 14722 - BLAST Mei2p [Pneumocystis carinii], at 616,864 to 619,118 14722

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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615,979 - -1.6
616,062 - -3.1
616,539 - 14721 mRNA_6353 0.85 -0.1
616,540 - 14721 mRNA_6353 0.85 +0.2
616,547 + 14721 mRNA_6353 0.86 -1.2
616,703 + +1.4
616,713 + -3.1
616,725 - -1.9
617,408 - 14722 mRNA_6354 0.24 -0.6
617,423 - 14722 mRNA_6354 0.25 -0.8
617,431 + 14722 mRNA_6354 0.25 -2.2
617,545 - 14722 mRNA_6354 0.30 -2.2
617,567 + 14722 mRNA_6354 0.31 -1.1

Or see this region's nucleotide sequence