Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6368

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6368: 14736 - KOG2049 Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily), at 651,947 to 653,420 14736

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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651,085 + -1.7
651,262 + -0.8
651,443 - -1.8
652,026 - -3.8
652,117 + 14736 mRNA_6368 0.12 -1.2
653,014 - 14736 mRNA_6368 0.72 -1.1
653,387 + -0.6
654,292 - -1.0
654,386 - -0.3

Or see this region's nucleotide sequence