Experiment: 40 hrs No Buoyancy Separation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
15025 and 15026 are separated by 160 nucleotides 15026 and 15027 are separated by 285 nucleotides
mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1,363,504 to 1,366,738
15025
mRNA_6658: 15026 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,366,899 to 1,370,407
15026
mRNA_6659: 15027 - K05663 ABC.ATM mitochondrial ABC transporter ATM, at 1,370,693 to 1,373,174
15027
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Per-strain Table Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation remove 1,365,906 - 15025 mRNA_6657 0.74 -1.2 1,366,210 + 15025 mRNA_6657 0.84 -0.7 1,366,353 + 15025 mRNA_6657 0.88 -1.0 1,366,361 - 15025 mRNA_6657 0.88 -0.3 1,366,385 + 15025 mRNA_6657 0.89 -1.5 1,366,387 - 15025 mRNA_6657 0.89 +0.1 1,366,493 - -1.7 1,366,518 + -3.6 1,366,657 - -1.9 1,366,659 + -1.8 1,366,665 - +0.2 1,366,671 + -0.1 1,366,676 + -0.1 1,366,791 - -1.3 1,366,791 - -1.6 1,366,791 - -3.3 1,366,791 - -0.1 1,366,793 - -3.5 1,366,809 + -2.3 1,366,819 + -1.9 1,366,821 - -0.9 1,366,822 + -2.4 1,366,826 + +0.1 1,366,835 + -0.6 1,366,836 - -2.3 1,366,838 + -1.8 1,366,841 + -1.3 1,366,849 + -1.5 1,366,861 + -0.2 1,366,871 - -1.3 1,366,874 + -2.4 1,366,933 - -2.1 1,366,935 + -1.6 1,367,107 - +0.1 1,367,108 + -1.8 1,367,121 - -2.0 1,367,146 + -1.5 1,367,213 - -2.3 1,367,263 + 15026 mRNA_6658 0.10 -2.6 1,367,269 - 15026 mRNA_6658 0.11 -1.2 1,367,409 - 15026 mRNA_6658 0.15 -0.6 1,367,977 - 15026 mRNA_6658 0.31 -1.0 1,368,007 - 15026 mRNA_6658 0.32 -1.6 1,368,055 + 15026 mRNA_6658 0.33 +1.6 1,368,573 - 15026 mRNA_6658 0.48 -1.1 1,368,894 + 15026 mRNA_6658 0.57 -2.2 1,369,780 - 15026 mRNA_6658 0.82 -3.1 1,369,796 + 15026 mRNA_6658 0.83 -0.6 1,370,018 - 15026 mRNA_6658 0.89 -0.6 1,370,202 - -2.0 1,370,209 + -1.3 1,370,234 - -0.2 1,370,364 - -2.0 1,370,406 + -0.4 1,370,512 - -2.0 1,370,514 + -1.6 1,370,530 + -2.3 1,370,558 + -3.9 1,370,563 - -1.5 1,370,676 - -2.1 1,370,691 - +0.6 1,370,815 + -2.0 1,371,090 + 15027 mRNA_6659 0.16 -2.2
Or see this region's nucleotide sequence