Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6764

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15132 and 15133 are separated by 181 nucleotides mRNA_6764: 15132 - K12273 SEC66 translocation protein SEC66, at 85,299 to 86,536 15132 mRNA_6765: 15133 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 86,718 to 88,049 15133

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
84,618 - -0.9
84,795 - -2.3
84,797 + -3.3
84,950 + +0.2
84,957 - -1.3
84,971 - -1.7
85,086 + -3.5
85,103 + -2.1
85,105 + -1.7
85,114 - -0.1
85,224 - -0.2
85,227 - -2.5
85,241 - -2.2
85,264 - -1.0
86,418 + -1.8
86,553 + -2.8
86,554 - -1.4
86,686 + -1.3
86,687 - -3.1
86,690 - -2.1
86,695 + -1.7
86,709 + -3.1
86,853 - 15133 mRNA_6765 0.10 -1.4
86,979 + 15133 mRNA_6765 0.20 -2.6
86,988 - 15133 mRNA_6765 0.20 -1.8
86,991 + 15133 mRNA_6765 0.20 -1.2
86,993 - 15133 mRNA_6765 0.21 -0.7
87,122 - 15133 mRNA_6765 0.30 -1.3
87,316 - 15133 mRNA_6765 0.45 +0.2

Or see this region's nucleotide sequence