Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6930

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15298 and 15299 are separated by 508 nucleotides mRNA_6930: 15298 - Hypothetical Protein, at 461,530 to 462,565 15298 mRNA_6931: 15299 - KOG4844 Mitochondrial ribosomal protein S27, at 463,074 to 463,703 15299

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
460,541 + -0.9
460,558 + -2.6
460,662 - -2.3
460,990 + -1.4
461,006 + -2.1
461,204 + -1.9
461,228 + -3.3
461,243 - -1.2
461,377 - -1.9
461,383 - -0.8
461,397 + -3.2
461,404 + +0.1
461,421 - +0.6
461,462 + -1.4
461,464 + -1.9
461,479 - -2.9
461,486 + -0.7
461,508 - -2.9
461,509 + -1.0
461,513 + -0.4
461,514 - -1.0
461,520 - -0.3
461,521 - +1.6
461,522 - +0.1
461,524 + +0.6
461,533 - +0.4
461,543 + -1.2
461,544 + -0.1
461,557 + -2.1
461,561 - +0.2
461,564 + -2.6
461,579 - -1.5
461,683 - 15298 mRNA_6930 0.15 -0.2
461,711 + 15298 mRNA_6930 0.17 -3.8
461,720 - 15298 mRNA_6930 0.18 -2.2
461,727 + 15298 mRNA_6930 0.19 -1.1
461,727 + 15298 mRNA_6930 0.19 -2.4
461,858 + 15298 mRNA_6930 0.32 -1.0
461,861 + 15298 mRNA_6930 0.32 -1.7
461,869 + 15298 mRNA_6930 0.33 +0.3
462,170 + 15298 mRNA_6930 0.62 -1.2
462,200 - 15298 mRNA_6930 0.65 -0.9
462,271 - 15298 mRNA_6930 0.72 -0.1
462,323 - 15298 mRNA_6930 0.77 -2.4
462,327 + 15298 mRNA_6930 0.77 -1.6
462,353 + 15298 mRNA_6930 0.79 -2.7
462,608 - -0.7
462,609 + -1.6
462,609 - -0.5
462,611 + -2.6
462,646 + -1.5
462,718 - -0.6
462,779 + -3.6
462,881 - -0.3
462,900 - +0.2

Or see this region's nucleotide sequence