Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7224

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15591 and 15592 are separated by 136 nucleotides15592 and 15593 are separated by 736 nucleotides mRNA_7223: 15591 - K19983 EXOC1, SEC3 exocyst complex component 1, at 1,166,927 to 1,171,458 15591 mRNA_7224: 15592 - K15564 CTK2 CTD kinase subunit beta, at 1,171,595 to 1,173,622 15592 mRNA_7225: 15593 - Hypothetical Protein, at 1,174,359 to 1,174,926 15593

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,171,507 - -0.8
1,171,513 - -1.5
1,173,950 + -2.7
1,174,294 + -3.4

Or see this region's nucleotide sequence