Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7265

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15632 and 15633 are separated by 609 nucleotides mRNA_7264: 15632 - Hypothetical Protein, at 1,254,558 to 1,258,564 15632 mRNA_7265: 15633 - Hypothetical Protein, at 1,259,174 to 1,259,392 15633

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,258,180 + -2.0
1,258,199 - -1.1
1,258,333 - -1.0
1,258,333 - -1.7
1,258,466 + -0.3
1,258,600 - -0.2
1,258,617 + -1.8
1,258,629 + -1.2
1,258,921 - -2.3
1,259,489 - -1.0
1,259,490 - -2.1
1,259,492 - -3.1
1,259,506 + -0.6
1,259,523 - -3.5
1,259,786 - -4.4
1,259,810 + -1.1
1,259,824 + -1.9
1,259,961 - +0.1
1,259,963 + -1.5
1,259,966 - -2.3
1,259,966 + -1.6
1,260,075 - +0.2
1,260,079 - +0.5
1,260,085 - -0.7
1,260,195 + -1.3
1,260,237 + -2.3
1,260,257 - -4.2

Or see this region's nucleotide sequence