Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7378

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7378: 15746 - KOG1180 Acyl-CoA synthetase, at 132,149 to 133,750 15746

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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131,164 - -1.5
131,165 + -3.1
131,292 + +0.2
131,462 + -2.0
131,608 - -2.3
131,638 - -2.3
131,885 - -1.3
131,887 - -0.9
131,898 + +0.3
131,911 + -0.4
131,915 - +1.0
131,953 - -1.0
132,031 + -0.1
132,051 + -3.4
132,083 - -0.4
132,094 + -1.2
132,094 - +1.1
132,095 + +0.7
132,103 + +1.0
132,104 - -2.1
132,106 - -3.0
132,107 + -2.0
132,116 + -2.6
132,128 + -1.7
132,134 + +0.6
132,135 + -1.4
132,141 - -0.7
132,214 + -2.6
132,215 + -2.6
132,244 - -0.0
132,268 + -1.9
132,401 - 15746 mRNA_7378 0.16 -1.0
132,830 - 15746 mRNA_7378 0.43 -0.1
132,834 + 15746 mRNA_7378 0.43 -2.1
133,131 - 15746 mRNA_7378 0.61 -1.5
133,714 + -2.3
134,124 + -0.1
134,449 + -1.3
134,744 + -0.6

Or see this region's nucleotide sequence