Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7407

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15774 and 15775 are separated by 581 nucleotides15775 and 15776 are separated by 120 nucleotides mRNA_7406: 15774 - Hypothetical Protein, at 200,473 to 201,495 15774 mRNA_7407: 15775 - Hypothetical Protein, at 202,077 to 204,575 15775 mRNA_7408: 15776 - K18422 MOV10 helicase MOV-10, at 204,696 to 207,946 15776

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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201,634 + +0.5
201,646 + -4.0
201,767 - -0.8
201,770 + -1.3
202,099 + -0.8
202,655 - 15775 mRNA_7407 0.23 -2.5
203,207 + 15775 mRNA_7407 0.45 +0.7
203,345 - 15775 mRNA_7407 0.51 -2.6
203,570 + 15775 mRNA_7407 0.60 +0.8
203,819 - 15775 mRNA_7407 0.70 -1.0
203,873 + 15775 mRNA_7407 0.72 -0.3
204,327 - -2.8
204,397 - +1.2
204,599 + +1.1
205,274 + 15776 mRNA_7408 0.18 -0.5
205,440 - 15776 mRNA_7408 0.23 -2.4

Or see this region's nucleotide sequence