Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7566

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15933 and 15934 are separated by 47 nucleotides15934 and 15935 are separated by 702 nucleotides mRNA_7565: 15933 - KOG0029 Amine oxidase, at 579,655 to 580,246 15933 mRNA_7566: 15934 - K12347 SLC11A, NRAMP natural resistance-associated macrophage protein, at 580,294 to 582,534 15934 mRNA_7567: 15935 - KOG2290 Rhomboid family proteins, at 583,237 to 585,869 15935

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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580,272 + -1.2

Or see this region's nucleotide sequence