Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7592

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15959 and 15960 are separated by 241 nucleotides15960 and 15961 are separated by 192 nucleotides mRNA_7591: 15959 - Hypothetical Protein, at 632,641 to 636,261 15959 mRNA_7592: 15960 - Hypothetical Protein, at 636,503 to 637,419 15960 mRNA_7593: 15961 - K15631 ABA3 molybdenum cofactor sulfurtransferase, at 637,612 to 640,700 15961

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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635,816 - 15959 mRNA_7591 0.88 +0.8
635,975 + +0.5
636,082 - -0.9
636,114 - -1.2
636,127 - -3.2
636,242 - +0.6
636,255 - -2.5
636,766 + 15960 mRNA_7592 0.29 -2.3
637,336 - -0.5
637,527 - -2.6
637,588 - -2.0
637,787 - -1.6
638,183 - 15961 mRNA_7593 0.18 -1.0
638,205 + 15961 mRNA_7593 0.19 -0.4

Or see this region's nucleotide sequence