Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7745

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16113 and 16114 are separated by 158 nucleotides mRNA_7745: 16113 - Hypothetical Protein, at 974,845 to 975,369 16113 mRNA_7746: 16114 - Hypothetical Protein, at 975,528 to 976,658 16114

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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973,939 + -2.7
974,109 - -1.4
974,111 + -2.3
974,114 - -2.0
974,119 - -1.8
974,122 + -0.7
974,125 - -2.0
974,127 + +1.8
974,127 + +0.8
974,128 + -1.5
974,128 + -0.0
974,153 + -1.0
974,249 - -1.8
974,249 - -1.8
974,252 - -1.5
974,268 - +0.3
974,269 + -1.4
974,543 + -1.2
974,835 + -2.4
975,274 - 16113 mRNA_7745 0.82 -3.2
975,394 + -1.0
975,396 - -0.8
975,404 - -1.9
975,463 - -1.4
975,480 - -3.1

Or see this region's nucleotide sequence