Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7766

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16132 and 16133 are separated by 215 nucleotides16133 and 16134 are separated by 309 nucleotides mRNA_7764: 16132 - Hypothetical Protein, at 1,014,055 to 1,015,066 16132 mRNA_7765: 16133 - KOG0118 FOG RRM domain, at 1,015,282 to 1,015,674 16133 mRNA_7766: 16134 - KOG0118 FOG RRM domain, at 1,015,984 to 1,016,398 16134

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,015,823 + -2.5
1,015,824 - -0.5
1,015,936 + -3.3
1,016,413 - +1.0
1,016,811 + -3.4
1,016,872 + -1.6
1,016,947 + -1.1
1,017,211 - -0.4
1,017,318 + -1.1

Or see this region's nucleotide sequence