Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7914

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7914: 16282 - K10684 UBLE1A, SAE1 ubiquitin-like 1-activating enzyme E1 A, at 8,793 to 10,247 16282

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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7,800 - +0.2
8,115 + -0.6
8,232 - -1.6
8,243 + -0.7
8,396 + -2.4
8,521 + -0.0
8,524 + -0.2
10,441 + -1.1
10,704 - -1.4
10,731 - +0.5
10,737 - -0.2
10,737 + -1.1
10,945 + +2.3
11,145 + -1.2

Or see this region's nucleotide sequence