Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8247

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16614 and 16615 are separated by 325 nucleotides mRNA_8246: 16614 - Hypothetical Protein, at 756,174 to 757,457 16614 mRNA_8247: 16615 - K01426 E3.5.1.4, amiE amidase, at 757,783 to 759,749 16615

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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756,806 + 16614 mRNA_8246 0.49 -3.9
756,835 + 16614 mRNA_8246 0.51 -2.4
757,841 + -1.2
758,066 - 16615 mRNA_8247 0.14 +0.2
758,712 - 16615 mRNA_8247 0.47 -2.1
759,427 - 16615 mRNA_8247 0.84 -0.8
759,697 - -1.9
759,835 - -4.0
759,861 - -2.5
759,862 + -0.7
759,866 - -0.3
759,874 - -0.1
759,882 + -1.5
759,883 - +1.7
759,887 - -1.0
759,889 - -1.1
759,890 + -4.1
759,899 + -2.0
759,899 + -2.5
759,899 - -1.1
759,907 + -0.5
759,935 - +0.1
760,054 + -0.2
760,055 + -1.8
760,070 + +0.0
760,072 + -0.7
760,179 - -1.0
760,318 - +0.1
760,329 + -1.3
760,357 - +0.6
760,490 + -1.9

Or see this region's nucleotide sequence