Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_206

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_206: 8574 - KOG0603 Ribosomal protein S6 kinase, at 503,090 to 504,560 8574

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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502,161 - -2.0
502,162 + -2.3
502,188 - -1.8
502,409 + -0.6
503,034 + -0.6
504,126 + 8574 mRNA_206 0.70 -0.5
504,181 - 8574 mRNA_206 0.74 +0.6
504,210 - 8574 mRNA_206 0.76 +2.2
504,338 - 8574 mRNA_206 0.85 +0.4
504,346 + 8574 mRNA_206 0.85 -1.9
504,594 - -0.4
504,923 - -3.2
504,935 + -1.4
504,955 - -2.0
505,093 - -2.2
505,345 + -1.8

Or see this region's nucleotide sequence