Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_967

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_967: 9335 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 94,555 to 95,203 9335

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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93,563 + +0.0
93,591 + -2.0
93,729 - -1.7
93,733 - -2.3
93,735 + -3.4
93,852 - -0.2
93,861 - -0.2
93,876 + -0.5
93,885 - +0.9
93,997 + -3.7
94,011 + +0.0
94,024 + -2.9
94,057 - -1.5
94,163 + -0.2
94,472 + -0.1
94,592 - -0.3
94,636 - 9335 mRNA_967 0.12 -1.7
95,313 - -1.0
95,626 - -1.9
95,634 + +1.1
95,783 + -2.4
95,922 - -0.4
95,956 - -2.0
96,046 + +1.5
96,072 - -1.6
96,074 - -2.5
96,090 + -0.7
96,189 - -0.0
96,203 - -2.6

Or see this region's nucleotide sequence