Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1362

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9729 and 9730 are separated by 935 nucleotides mRNA_1361: 9729 - Hypothetical Protein, at 90,771 to 91,579 9729 mRNA_1362: 9730 - K00507 SCD, desC stearoyl-CoA desaturase (Delta-9 desaturase), at 92,515 to 94,818 9730

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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91,554 - -0.0
91,689 + +0.4
91,699 + -1.4
91,714 + -1.8
91,818 - -1.8
91,935 - -2.9
91,935 - -2.7
91,938 + +1.0
91,959 - +1.7
91,978 - -2.5
92,007 + -2.2
92,008 + +0.1
92,008 + -3.5
92,010 + -2.0
92,027 + -2.6
92,058 - -1.0
92,090 - -2.2
92,094 + -2.1
92,105 - -0.8
92,128 + -2.3
92,131 - -0.4
92,142 - -0.5
92,143 + -2.0
92,155 + -3.5
92,162 - -1.3
92,176 - +0.1
92,206 + -2.1
92,212 + -2.3
92,212 - +0.5
92,221 - -0.1
92,255 - -0.9
92,270 - -2.5
92,272 - -1.5
92,282 - -2.8
92,285 + +1.0
92,291 + -0.3
92,295 - -0.7
92,302 - -0.1
92,308 + -1.1
94,918 + -3.6
95,018 - -2.9
95,109 + -0.7
95,115 + -0.8
95,134 - -1.7
95,170 + -2.1
95,437 - -3.1
95,442 - -2.3
95,492 + -0.4

Or see this region's nucleotide sequence