Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3414

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11781 and 11782 are separated by 490 nucleotides mRNA_3413: 11781 - K00622 nat arylamine N-acetyltransferase, at 34,768 to 35,867 11781 mRNA_3414: 11782 - Hypothetical Protein, at 36,358 to 36,969 11782

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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36,435 + 11782 mRNA_3414 0.13 -0.9
36,805 + 11782 mRNA_3414 0.73 -1.6
36,934 - +1.3
36,938 - +0.5
37,193 - +0.5

Or see this region's nucleotide sequence