Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4034

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12402 and 12403 are separated by 803 nucleotides mRNA_4034: 12402 - K13181 DDX27, DRS1 ATP-dependent RNA helicase DDX27, at 1,204,486 to 1,207,026 12402 mRNA_4035: 12403 - Hypothetical Protein, at 1,207,830 to 1,209,196 12403

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,206,435 + 12402 mRNA_4034 0.77 +0.5
1,206,991 - -0.3
1,207,146 - -0.3
1,207,149 + -0.2
1,207,165 + -0.7
1,207,306 + +1.9
1,207,321 + +0.7
1,207,687 + +0.2

Or see this region's nucleotide sequence