Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4688

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4688: 13056 - Hypothetical Protein, at 778,023 to 779,802 13056

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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777,121 + +0.6
777,267 - +0.3
777,709 + -0.0
777,863 + +0.1
777,875 + -0.3
777,892 - -0.9
778,013 - -0.1
778,026 + +0.1
778,195 + +0.5
778,309 + 13056 mRNA_4688 0.16 -0.0
778,314 + 13056 mRNA_4688 0.16 +1.9
778,451 - 13056 mRNA_4688 0.24 +1.5
778,470 + 13056 mRNA_4688 0.25 -0.7
778,596 - 13056 mRNA_4688 0.32 +0.3
778,630 - 13056 mRNA_4688 0.34 +0.5
779,453 + 13056 mRNA_4688 0.80 +0.3
780,086 - -0.5
780,087 - -0.1
780,195 + +1.9
780,220 - -0.8

Or see this region's nucleotide sequence