Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5383

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5383: 13751 - Hypothetical Protein, at 612,955 to 613,540 13751

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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612,092 - +1.7
612,289 - -2.0
612,330 - -0.0
612,337 + -0.8
612,437 + -0.6
612,534 + +0.3
612,594 - -0.2
612,617 + +0.2
612,720 - +0.0
612,723 + +0.3
612,723 + +0.2
612,732 + -0.5
612,864 + +0.2
612,873 + +0.3
612,874 - +0.3
612,893 + +0.5
612,899 - -1.1
612,900 + +0.2
612,900 + +0.8
613,033 - 13751 mRNA_5383 0.13 +0.4
613,090 + 13751 mRNA_5383 0.23 +1.3
613,144 - 13751 mRNA_5383 0.32 -0.2
613,169 - 13751 mRNA_5383 0.37 +0.1
613,208 + 13751 mRNA_5383 0.43 +1.4
613,213 + 13751 mRNA_5383 0.44 -0.1
613,275 - 13751 mRNA_5383 0.55 -0.2
613,318 - 13751 mRNA_5383 0.62 +0.2
613,322 + 13751 mRNA_5383 0.63 -0.7
613,395 + 13751 mRNA_5383 0.75 +0.6
613,396 + 13751 mRNA_5383 0.75 +0.1
613,409 + 13751 mRNA_5383 0.77 -1.4
613,419 + 13751 mRNA_5383 0.79 +1.9
613,421 + 13751 mRNA_5383 0.80 -0.1
613,468 - 13751 mRNA_5383 0.88 -0.6
613,478 + 13751 mRNA_5383 0.89 -0.2
613,484 - +0.3
613,494 + -1.5
613,506 + +0.3
613,510 + -0.0
613,513 - -1.2
613,513 + +0.2
613,530 + +0.3
613,533 + +1.3
613,614 - -0.1
613,638 + +0.4
613,638 - +0.6
613,641 - +0.2
613,693 - +0.5
613,700 - -0.4
613,873 + +0.3
613,883 - +1.0
613,902 - +1.2
614,024 - -0.1
614,117 + -0.4
614,135 - -0.7
614,386 - +0.4

Or see this region's nucleotide sequence