Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5642

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14009 and 14010 are separated by 304 nucleotides14010 and 14011 are separated by 306 nucleotides mRNA_5641: 14009 - K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17, at 576,062 to 577,225 14009 mRNA_5642: 14010 - Interpro Mitochondrial inner-membrane-bound regulator, at 577,530 to 579,606 14010 mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579,913 to 580,872 14011

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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577,280 + -0.7
577,966 - 14010 mRNA_5642 0.21 -0.4
580,580 + 14011 mRNA_5643 0.69 +0.5

Or see this region's nucleotide sequence