Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5786

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14153 and 14154 are separated by 470 nucleotides14154 and 14155 are separated by 401 nucleotides mRNA_5785: 14153 - K14758 HRR25 casein kinase I homolog HRR25, at 937,212 to 938,671 14153 mRNA_5786: 14154 - Hypothetical Protein, at 939,142 to 939,826 14154 mRNA_5787: 14155 - Hypothetical Protein, at 940,228 to 943,427 14155

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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938,912 - -0.1
938,978 - -0.3
938,995 - -0.4
939,129 + -0.4
939,842 - +0.2
939,983 + -0.3
940,137 - -0.0
940,151 + -0.2
940,192 + +0.2
940,307 + -0.2
940,326 + -0.2
940,326 - +0.7
940,472 + -0.4
940,608 + 14155 mRNA_5787 0.12 -0.8

Or see this region's nucleotide sequence