Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6073

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14440 and 14441 are separated by 90 nucleotides mRNA_6072: 14440 - Hypothetical Protein, at 1,577,752 to 1,580,946 14440 mRNA_6073: 14441 - Hypothetical Protein, at 1,581,037 to 1,581,657 14441

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,580,100 + 14440 mRNA_6072 0.73 -0.9
1,580,137 + 14440 mRNA_6072 0.75 -0.2
1,580,393 + 14440 mRNA_6072 0.83 +0.7
1,580,502 + 14440 mRNA_6072 0.86 -0.8
1,580,600 - 14440 mRNA_6072 0.89 +0.1
1,581,198 - 14441 mRNA_6073 0.26 +0.3
1,581,290 - 14441 mRNA_6073 0.41 +2.2
1,581,449 - 14441 mRNA_6073 0.66 -0.6
1,581,584 + 14441 mRNA_6073 0.88 +0.1
1,582,301 + +0.2
1,582,384 - -0.3

Or see this region's nucleotide sequence