Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6239

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6239: 14607 - K01372 BLMH, pepC bleomycin hydrolase, at 328,080 to 329,843 14607

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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327,103 - +0.3
327,118 + +1.0
327,367 - +0.2
327,412 + +0.1
327,530 - -0.5
327,539 + +0.4
327,547 - +0.2
327,550 + +0.1
327,553 - +0.8
327,564 - +0.5
327,703 + +1.1
327,779 - -1.1
327,808 - -0.1
327,810 + -1.2
327,821 + +0.4
327,825 + +0.6
327,837 + -0.8
327,854 - -1.5
327,862 + +0.0
327,862 + +0.6
327,881 + -0.3
327,986 - +0.3
328,015 + +0.8
328,020 - +0.9
328,119 - +0.9
328,160 - +0.2
328,311 + 14607 mRNA_6239 0.13 +1.0
328,314 - 14607 mRNA_6239 0.13 +0.3
328,631 + 14607 mRNA_6239 0.31 -1.1
329,521 + 14607 mRNA_6239 0.82 -0.0
329,915 - +1.6
330,117 + -0.4
330,200 - +0.4
330,218 + +0.4
330,222 - +0.2
330,230 + -0.1
330,236 - -1.4
330,237 + -0.4
330,238 + -0.8
330,245 + +0.5
330,250 + +0.1
330,317 + -1.8
330,335 - +1.6
330,355 + -0.2
330,355 + +0.6
330,386 - +0.1
330,387 - -0.1
330,387 + -0.3
330,387 - +0.9
330,397 - -1.2
330,411 + +0.1
330,437 - +0.3
330,548 + +0.4
330,555 + +0.5
330,575 + +0.6
330,651 + +0.5
330,656 + +0.0
330,667 + -0.1
330,688 + -0.3
330,696 - +0.3
330,713 - +0.1
330,723 + +0.2
330,729 + +0.4
330,732 + +0.1

Or see this region's nucleotide sequence