Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6266

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14634 and 14635 are separated by 219 nucleotides mRNA_6266: 14634 - Hypothetical Protein, at 396,556 to 399,256 14634 mRNA_6267: 14635 - KOG1721 FOG Zn-finger, at 399,476 to 403,885 14635

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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398,544 + 14634 mRNA_6266 0.74 -0.6
399,156 - +0.0
399,162 - +0.0
399,165 - +0.2
399,179 - +0.1
399,185 + -0.3
399,188 - -1.0
399,300 - +1.1
399,305 - +0.0
399,305 - -1.2
399,306 - -0.5
399,315 + +0.6
399,316 - +0.4
399,316 - -1.4
399,318 - +0.5
399,324 - -1.5
399,325 + -1.0
399,338 + +0.3
399,344 - -0.6
399,349 - +0.2
399,489 + +0.0
399,523 + +0.4
399,654 + +1.2
399,796 - -1.0
399,915 - +1.2

Or see this region's nucleotide sequence