Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6851

Experiment: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15218 and 15219 are separated by 209 nucleotides mRNA_6850: 15218 - K05605 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, at 272,004 to 274,065 15218 mRNA_6851: 15219 - Hypothetical Protein, at 274,275 to 275,000 15219

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
273,291 - 15218 mRNA_6850 0.62 +0.1
273,308 + 15218 mRNA_6850 0.63 -0.5
273,895 + +0.1
274,289 + -0.1
274,298 + +0.3
274,314 - -1.0
274,405 - 15219 mRNA_6851 0.18 -0.2
274,585 - 15219 mRNA_6851 0.43 -0.4
274,747 - 15219 mRNA_6851 0.65 +0.2
274,893 - 15219 mRNA_6851 0.85 -0.5
275,921 + -0.1

Or see this region's nucleotide sequence