Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6918

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15286 and 15287 are separated by 252 nucleotides mRNA_6918: 15286 - HMMPfam-Coiled-coil domain-containing protein 56-PF09813, at 430,003 to 430,506 15286 mRNA_6919: 15287 - K07556 ATPeAF2, ATPAF2, ATP12 ATP synthase mitochondrial F1 complex assembly factor 2, at 430,759 to 431,959 15287

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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429,204 - -1.8
429,239 + -0.7
429,314 - -0.1
429,332 + -0.3
429,369 - +0.3
429,394 + +0.8
429,425 + +0.0
429,500 - +2.0
429,509 + -0.0
429,512 - -0.2
429,516 - +1.5
429,522 - -1.7
429,522 - +0.3
429,527 + -0.3
429,550 + -1.8
429,557 + +0.3
429,564 + +1.5
429,596 + -0.4
429,597 - +0.6
429,600 + +2.2
429,609 + -0.2
429,612 - -0.9
429,621 - +0.1
429,626 - +0.0
429,634 + -0.7
429,651 - -0.2
429,661 - -0.2
429,784 + +0.1
429,786 - +1.2
429,799 - +0.4
430,705 - -1.4
430,722 - -0.8

Or see this region's nucleotide sequence