Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7113

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15480 and 15481 are separated by 211 nucleotides15481 and 15482 are separated by 889 nucleotides mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910,088 to 911,391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911,603 to 912,181 15481 mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913,071 to 914,998 15482

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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910,929 + 15480 mRNA_7112 0.64 -0.4
910,966 + 15480 mRNA_7112 0.67 +0.3
911,660 - -0.2
911,943 - 15481 mRNA_7113 0.59 -0.4
912,104 - 15481 mRNA_7113 0.87 -0.7
912,522 - -0.5
912,549 + -0.8
912,550 - +0.2
912,557 - -0.3
912,601 - -0.4
912,615 + +1.5
912,632 + +0.8
912,709 + +0.2
912,729 + +0.0
912,750 - -1.3

Or see this region's nucleotide sequence