Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7730

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16097 and 16098 are separated by 692 nucleotides mRNA_7729: 16097 - KOG0537 Cytochrome b5, at 944,449 to 944,897 16097 mRNA_7730: 16098 - Hypothetical Protein, at 945,590 to 946,257 16098

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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945,382 - +0.6
945,728 - 16098 mRNA_7730 0.21 +0.2
946,100 - 16098 mRNA_7730 0.76 +0.1
946,389 + +0.3
946,432 + +0.0
946,482 - -1.1
946,546 + +0.2
946,573 + -1.5
946,670 - -0.9
946,712 + -0.2
946,860 - +0.3
946,996 - +0.3
946,999 - -0.1
947,005 - -1.4
947,026 - -0.0
947,095 + -0.4

Or see this region's nucleotide sequence