Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_499

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8867 and 8868 are separated by 301 nucleotides mRNA_499: 8867 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1,185,314 to 1,188,631 8867 mRNA_500: 8868 - KOG2543 Origin recognition complex, subunit 5, at 1,188,933 to 1,191,266 8868

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,188,647 - +0.5
1,188,664 + -0.8
1,188,686 + +0.4
1,188,688 + -0.7
1,188,706 + +0.1
1,188,948 + -0.6

Or see this region's nucleotide sequence