Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2349

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10716 and 10717 are separated by 282 nucleotides10717 and 10718 are separated by 285 nucleotides mRNA_2348: 10716 - K00762 pyrE orotate phosphoribosyltransferase, at 682,328 to 683,011 10716 mRNA_2349: 10717 - KOG3419 Mitochondrial/chloroplast ribosomal protein S16, at 683,294 to 683,869 10717 mRNA_2350: 10718 - K14829 IPI3 pre-rRNA-processing protein IPI3, at 684,155 to 686,161 10718

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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682,327 - +1.8
683,098 + +0.3
683,260 - +0.5

Or see this region's nucleotide sequence