Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2685

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11052 and 11053 are separated by 762 nucleotides mRNA_2684: 11052 - K02144 ATPeV1H V-type H+-transporting ATPase subunit H, at 775,644 to 777,796 11052 mRNA_2685: 11053 - Hypothetical Protein, at 778,559 to 779,074 11053

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
777,797 + +0.6
777,799 - -1.7
777,812 - -0.5
777,843 + -0.5
777,919 - +0.7
777,954 - +0.4
777,954 - +0.5
777,993 + -0.3
778,011 - +0.1
778,082 - +0.8
778,089 - -0.1
778,126 + +0.3
778,203 + -0.1
778,222 - -0.7
778,233 - -0.0
778,253 - +0.6
778,282 - +0.1
778,306 + +0.3
778,352 - +1.1
778,367 - -0.2
778,426 - +0.4
778,433 - +0.3
778,453 + +0.9
778,487 - +0.3
778,495 - -0.5
778,520 + +0.3
778,538 - +0.4
778,549 - -0.3
778,550 - +0.4
778,590 - +0.1
778,596 + +0.9
778,638 - 11053 mRNA_2685 0.15 +0.4
778,697 + 11053 mRNA_2685 0.27 +0.5
778,714 + 11053 mRNA_2685 0.30 +0.9
778,719 + 11053 mRNA_2685 0.31 +0.8
778,744 - 11053 mRNA_2685 0.36 -0.4
778,761 - 11053 mRNA_2685 0.39 +0.4
778,762 + 11053 mRNA_2685 0.39 +1.2
778,763 + 11053 mRNA_2685 0.40 -1.0
778,786 + 11053 mRNA_2685 0.44 +1.6
778,826 - 11053 mRNA_2685 0.52 -0.3
778,834 - 11053 mRNA_2685 0.53 -0.3
778,838 - 11053 mRNA_2685 0.54 +0.7
778,838 - 11053 mRNA_2685 0.54 +0.6
778,842 - 11053 mRNA_2685 0.55 +1.1
778,847 + 11053 mRNA_2685 0.56 -0.3
778,848 + 11053 mRNA_2685 0.56 -0.0
778,852 - 11053 mRNA_2685 0.57 -0.1
778,853 + 11053 mRNA_2685 0.57 +1.2
778,857 - 11053 mRNA_2685 0.58 -1.1
778,866 - 11053 mRNA_2685 0.59 +0.3
778,869 - 11053 mRNA_2685 0.60 -0.0
778,870 - 11053 mRNA_2685 0.60 -0.0
778,908 + 11053 mRNA_2685 0.68 -0.6
778,913 - 11053 mRNA_2685 0.69 +1.1
778,913 + 11053 mRNA_2685 0.69 +0.0
778,914 + 11053 mRNA_2685 0.69 -0.8
778,935 - 11053 mRNA_2685 0.73 -0.1
778,976 - 11053 mRNA_2685 0.81 +1.3
778,981 + 11053 mRNA_2685 0.82 -0.7
779,004 - 11053 mRNA_2685 0.86 +0.2
779,024 - -0.4
779,027 - +0.6
779,032 - +0.4
779,067 - -0.1
779,094 - +0.1
779,106 + +0.4
779,111 - -0.7
779,116 - -0.1
779,118 - -0.4
779,121 - -0.4
779,122 - -0.8
779,122 + +0.8
779,130 - +0.2
779,135 - +1.0
779,143 - -0.5
779,157 + +0.7
779,159 + +1.2
779,159 + -0.0
779,161 + +0.3
779,161 - -0.3
779,162 + -0.6
779,162 + +0.6
779,163 + +0.3
779,171 - -0.0
779,176 - +0.5
779,179 - -0.1
779,181 - -0.9
779,182 - -0.2
779,183 - -0.8
779,184 - +0.9
779,186 - -0.1

Or see this region's nucleotide sequence