Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2695

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2695: 11063 - Hypothetical Protein, at 23,956 to 24,690 11063

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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22,975 - -0.3
22,975 - -1.2
23,076 + -1.0
23,235 - +0.1
23,391 - +0.1
23,404 - -0.1
23,406 - +1.4
23,412 - -0.5
23,429 + +0.9
23,435 - +0.3
23,671 - +1.6
23,869 + -0.0
23,872 - +1.2
23,880 + +0.4
23,881 + -0.7
24,034 + 11063 mRNA_2695 0.11 -0.0
24,054 + 11063 mRNA_2695 0.13 +0.6
24,292 + 11063 mRNA_2695 0.46 -0.4
24,302 - 11063 mRNA_2695 0.47 +0.1
24,475 + 11063 mRNA_2695 0.71 -0.0
24,520 - 11063 mRNA_2695 0.77 +0.9
24,557 - 11063 mRNA_2695 0.82 -0.7
24,577 - 11063 mRNA_2695 0.84 +0.4
24,578 - 11063 mRNA_2695 0.85 +0.6
24,632 + +0.7
24,734 + +0.6
24,742 + +0.5
24,743 + +0.0
24,759 - +0.6
24,880 - -0.1
24,881 - +0.6
24,882 - -0.2
24,884 - -0.3
24,887 - -0.1
24,890 + -0.6
24,893 + -0.4
24,898 - +0.3
24,906 - -0.7
24,910 - -0.2
24,988 + +0.4
25,051 + +0.0
25,101 - +1.0
25,175 - +0.3
25,194 - -0.1
25,236 + +1.1
25,258 - -0.2
25,263 - +0.2
25,292 - -0.9
25,294 - +0.2
25,294 - +0.9
25,313 + +0.2
25,344 - -0.3
25,362 - +2.0
25,376 + +0.1
25,439 - +1.4
25,447 + +2.1
25,459 + +1.6
25,466 - +0.1
25,469 - +0.9
25,471 - -0.2
25,575 + +0.3
25,586 + +0.2
25,642 + +0.2
25,654 - -0.0
25,668 + +0.8

Or see this region's nucleotide sequence