Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2696

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11064 and 11065 are separated by 890 nucleotides mRNA_2696: 11064 - K02147 ATPeV1B, ATP6B V-type H+-transporting ATPase subunit B, at 25,787 to 28,355 11064 mRNA_2697: 11065 - Hypothetical Protein, at 29,246 to 31,443 11065

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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24,880 - -0.1
24,881 - +0.6
24,882 - -0.2
24,884 - -0.3
24,887 - -0.1
24,890 + -0.6
24,893 + -0.4
24,898 - +0.3
24,906 - -0.7
24,910 - -0.2
24,988 + +0.4
25,051 + +0.0
25,101 - +1.0
25,175 - +0.3
25,194 - -0.1
25,236 + +1.1
25,258 - -0.2
25,263 - +0.2
25,292 - -0.9
25,294 - +0.2
25,294 - +0.9
25,313 + +0.2
25,344 - -0.3
25,362 - +2.0
25,376 + +0.1
25,439 - +1.4
25,447 + +2.1
25,459 + +1.6
25,466 - +0.1
25,469 - +0.9
25,471 - -0.2
25,575 + +0.3
25,586 + +0.2
25,642 + +0.2
25,654 - -0.0
25,668 + +0.8
25,758 + +0.8
25,765 + -0.2
25,770 + +0.5
28,411 - -0.2
28,688 - +0.4
28,697 - +0.6
28,716 + +1.2
28,845 + +0.1
29,004 - -0.2
29,011 + +1.6
29,014 - +0.7
29,024 - -0.1
29,032 + +0.7
29,033 - -0.4
29,044 - +0.1
29,045 - +0.3
29,160 - +0.7
29,161 - +1.1
29,186 + +0.9
29,323 - -0.4

Or see this region's nucleotide sequence