Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2700

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2700: 11068 - K03019 RPC11, POLR3K DNA-directed RNA polymerase III subunit RPC11, at 35,824 to 36,615 11068

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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34,908 - +0.1
35,225 - +0.2
35,345 - +0.5
35,374 - +0.3
35,376 - +0.7
35,537 - -0.4
35,647 + +0.3
35,661 - +0.5
35,795 + +0.8
36,620 + +2.2
36,794 - +0.7
37,069 - +0.8
37,098 + +0.5
37,101 - +0.1
37,228 + -0.3
37,284 + +0.8
37,404 + +0.4
37,414 + +0.9
37,418 + +0.6
37,421 + +0.1
37,568 + +0.2

Or see this region's nucleotide sequence