Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2916

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2916: 11284 - Hypothetical Protein, at 541,786 to 542,097 11284

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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540,826 - -0.3
541,654 + -0.8
541,663 + -0.1
541,805 - +1.1
542,764 + +0.8
542,766 + -0.7
542,905 + -0.8
543,033 - -0.4
543,049 - +0.7
543,051 - -0.8

Or see this region's nucleotide sequence