Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3266

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11634 and 11635 are separated by 624 nucleotides mRNA_3266: 11634 - K14763 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1, at 246,673 to 247,957 11634 mRNA_3267: 11635 - K02357 tsf, TSFM elongation factor Ts, at 248,582 to 249,766 11635

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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245,749 - +0.4
245,751 - -0.1
245,770 + +1.4
245,774 + +0.2
245,902 + -1.5
246,365 - -0.9
246,493 - +0.5
248,340 - -0.3
248,500 - +0.4

Or see this region's nucleotide sequence