Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3866

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3866: 12234 - Hypothetical Protein, at 780,640 to 781,665 12234

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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780,173 - -0.3
780,314 + +1.1
780,434 + -0.2
780,506 - -0.6
780,550 - -0.9
780,689 - +0.3
780,710 - -0.0
780,711 - -1.4
780,712 + +0.3
780,715 + -0.5
780,741 + -0.2
781,332 + 12234 mRNA_3866 0.67 -0.0
781,879 + +0.7
781,929 + +0.3
782,028 - +1.5
782,580 + -1.2
782,581 + +2.4

Or see this region's nucleotide sequence