Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4000

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4000: 12368 - BLAST Myosin heavy chain, striated muscle [Argopecten irrad..., at 1,116,846 to 1,118,153 12368

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,115,846 - -0.0
1,115,968 - +0.1
1,115,983 - -0.2
1,116,129 - +1.6
1,116,311 + -0.8
1,116,314 + -0.2
1,116,314 - +0.9
1,116,314 + +1.8
1,116,321 - -0.3
1,116,446 + +0.4
1,116,448 + +1.0
1,116,586 + -0.0
1,116,592 + +1.0
1,116,603 + -0.4
1,117,456 - 12368 mRNA_4000 0.47 +1.1
1,118,197 - +0.0
1,118,214 + -0.4
1,118,652 + +0.0
1,118,745 + +0.1
1,118,964 - +0.7
1,119,075 + +0.3

Or see this region's nucleotide sequence