Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4132

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4132: 12500 - Hypothetical Protein, at 1,425,478 to 1,426,122 12500

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,424,591 - -0.5
1,424,730 + +0.3
1,424,756 + +0.6
1,424,882 + +0.7
1,424,911 - +0.3
1,425,019 + +2.7
1,425,034 + -0.8
1,425,045 + +0.1
1,425,048 - +0.2
1,425,048 - -0.3
1,425,050 + -0.8
1,425,063 + +0.4
1,425,064 + +0.3
1,425,091 + +0.7
1,425,095 - +0.4
1,425,104 - +0.5
1,425,109 - +0.8
1,425,110 - -0.4
1,425,113 + +0.4
1,425,118 + +0.4
1,425,127 + +0.7
1,425,130 + +0.5
1,425,136 - -0.2
1,425,139 + +1.0
1,425,288 + +0.6
1,425,290 - -0.3
1,425,407 + +0.2
1,425,562 - 12500 mRNA_4132 0.13 +0.6
1,425,793 + 12500 mRNA_4132 0.49 -0.6
1,425,845 - 12500 mRNA_4132 0.57 +0.4
1,425,857 + 12500 mRNA_4132 0.59 +1.4
1,425,880 + 12500 mRNA_4132 0.62 +0.2
1,426,155 - -0.5
1,426,309 + -0.8
1,426,418 + +0.7
1,426,429 + -0.2
1,426,592 - -1.6
1,427,010 - +0.1
1,427,011 + +0.2
1,427,037 + +0.1

Or see this region's nucleotide sequence