Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4832

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13199 and 13200 are separated by 154 nucleotides13200 and 13201 are separated by 190 nucleotides mRNA_4831: 13199 - K11559 mis12, MTW1 kinetochore protein Mis12/MTW1, at 1,108,438 to 1,109,604 13199 mRNA_4832: 13200 - KOG4168 Predicted RNA polymerase III subunit C17, at 1,109,759 to 1,110,628 13200 mRNA_4833: 13201 - K05755 ARPC4 actin related protein 2/3 complex, subunit 4, at 1,110,819 to 1,111,714 13201

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,109,654 - +1.1
1,109,684 - +0.4
1,109,686 - -0.0
1,110,699 - -0.2

Or see this region's nucleotide sequence