Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5391

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13758 and 13759 are separated by 344 nucleotides mRNA_5390: 13758 - K03065 PSMC3, RPT5 26S proteasome regulatory subunit T5, at 631,553 to 634,043 13758 mRNA_5391: 13759 - HMMPfam-ATP synthase j chain-PF04911, at 634,388 to 634,888 13759

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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634,081 - +1.5
634,098 + -0.1
634,151 + -0.5
634,173 + -0.5
634,893 + +0.1
634,911 + +1.1
635,210 + +0.0
635,350 - +0.1
635,449 + -0.2
635,513 - +0.1
635,538 + -0.4
635,630 + +0.1
635,664 + +0.5
635,844 + -0.1

Or see this region's nucleotide sequence