Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5917

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14284 and 14285 are separated by 622 nucleotides mRNA_5916: 14284 - Hypothetical Protein, at 1,237,928 to 1,238,672 14284 mRNA_5917: 14285 - Hypothetical Protein, at 1,239,295 to 1,239,997 14285

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,238,427 + 14284 mRNA_5916 0.67 -0.9
1,238,428 + 14284 mRNA_5916 0.67 -0.1
1,238,581 - 14284 mRNA_5916 0.88 +0.5
1,238,823 - -0.0
1,239,049 + -0.1
1,239,134 - +0.3
1,239,311 - -0.3
1,239,752 - 14285 mRNA_5917 0.65 -0.4
1,240,189 - +0.5
1,240,356 + +1.3
1,240,582 - -0.1
1,240,785 + -1.3
1,240,790 + +0.2
1,240,952 - -0.1

Or see this region's nucleotide sequence