Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6227

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14594 and 14595 are separated by 966 nucleotides mRNA_6226: 14594 - Hypothetical Protein, at 297,535 to 298,697 14594 mRNA_6227: 14595 - BLAST DEAD box helicase [Trichophyton violaceum], at 299,664 to 299,897 14595

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
298,664 + +0.6
298,755 + +0.8
298,756 - +1.0
298,757 + -0.5
298,764 + +0.7
298,953 + -0.2
299,024 + -1.0
299,095 - +0.1
299,099 - +0.0
299,105 + -0.6
299,105 - +1.2
299,106 + +1.4
299,147 - -0.1
299,151 + -0.1
299,159 - +0.6
299,160 + -0.2
299,205 + +0.4
299,207 - +0.9
299,230 + -0.9
299,787 + 14595 mRNA_6227 0.53 -0.3
299,907 + -0.2
299,919 - +0.8
299,921 + +0.6
299,931 + +1.4
299,935 - +0.9
299,938 + +0.7
299,946 + +0.8
299,971 - +0.2
299,976 - +1.0
299,977 + -1.4
299,984 + -0.1
300,013 - +0.7
300,014 - -1.1
300,022 - +1.4
300,030 + +0.2
300,287 + +0.5
300,306 + -0.4
300,851 - +0.2

Or see this region's nucleotide sequence