Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6718

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15086 and 15087 are separated by 994 nucleotides mRNA_6718: 15086 - K13711 PI4K2 phosphatidylinositol 4-kinase type 2, at 1,526,282 to 1,529,015 15086 mRNA_6719: 15087 - Hypothetical Protein, at 1,530,010 to 1,530,905 15087

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,525,772 - -0.6
1,525,794 - -0.8
1,525,865 + +0.1
1,525,896 - +0.2
1,526,001 + +1.7
1,526,049 - +0.4
1,526,280 - +1.0
1,526,296 + +0.1
1,526,459 - +0.9
1,526,534 - +0.3
1,526,575 + 15086 mRNA_6718 0.11 +1.8
1,526,610 - 15086 mRNA_6718 0.12 -0.4
1,526,629 + 15086 mRNA_6718 0.13 +0.4
1,526,727 + 15086 mRNA_6718 0.16 -0.0
1,526,846 - 15086 mRNA_6718 0.21 +0.9
1,526,894 - 15086 mRNA_6718 0.22 +1.4
1,527,167 - 15086 mRNA_6718 0.32 +0.4
1,527,644 + 15086 mRNA_6718 0.50 +0.6
1,527,737 - 15086 mRNA_6718 0.53 +1.6
1,527,762 - 15086 mRNA_6718 0.54 +1.1
1,527,788 + 15086 mRNA_6718 0.55 +1.1
1,527,841 + 15086 mRNA_6718 0.57 +0.1
1,527,854 + 15086 mRNA_6718 0.57 +1.5
1,528,084 + 15086 mRNA_6718 0.66 -0.3
1,528,302 - 15086 mRNA_6718 0.74 +0.4
1,528,302 + 15086 mRNA_6718 0.74 +1.0
1,528,427 + 15086 mRNA_6718 0.78 +1.2
1,528,471 + 15086 mRNA_6718 0.80 +0.7
1,528,490 + 15086 mRNA_6718 0.81 -0.5
1,528,647 - 15086 mRNA_6718 0.87 +0.9
1,528,656 + 15086 mRNA_6718 0.87 -0.9
1,528,657 - 15086 mRNA_6718 0.87 -0.0
1,528,731 + 15086 mRNA_6718 0.90 +1.1
1,528,884 - +0.5
1,528,972 + +0.1
1,529,086 - -0.8
1,529,114 + -1.7
1,529,168 + +0.4
1,529,201 - +0.1
1,529,270 + -0.2
1,529,273 + +0.1
1,529,794 + +0.3
1,529,796 - +1.0

Or see this region's nucleotide sequence