Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6846

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6846: 15214 - K02603 ORC1 origin recognition complex subunit 1, at 260,829 to 263,990 15214

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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259,907 + -0.0
260,031 + +1.4
260,159 + -0.7
260,283 - +0.3
260,326 + +0.2
260,421 - -1.6
260,433 + +1.0
260,439 - +0.3
260,444 + +0.3
260,450 + +0.5
260,508 - +0.1
260,575 - -0.1
260,751 + +0.0
260,752 + +0.3
260,754 - -0.1
260,963 - +0.6
261,062 - +0.1
261,209 - 15214 mRNA_6846 0.12 +0.3
261,414 - 15214 mRNA_6846 0.19 -0.3
262,352 + 15214 mRNA_6846 0.48 +0.2
264,067 - -1.0
264,248 - -0.2
264,400 + -1.0
264,551 + -0.6
264,583 + +0.7
264,707 + +0.1
264,709 - +0.2
264,857 + -0.2
264,858 - +0.3
264,868 - +0.0
264,870 - -0.2
264,872 - +0.4
264,875 + -0.0
264,877 + +0.9
264,886 + -0.1
264,893 - +0.2
264,897 - -0.1
264,906 - -0.3
264,907 - +0.4
264,925 - +0.9
264,981 + +0.4

Or see this region's nucleotide sequence